Installing Openslide with Matlab toolbox

Thu Jun 26 13:34:51 EDT 2014

 Hi Mr. Gilbert,

*1.  This is the contents of mHeader.m:*

function [methodinfo,structs,enuminfo,ThunkLibName]=mHeader
%MHEADER Create structures to define interfaces found in 'openslide'.

%This function was generated by loadlibrary.m parser version 1.1.6.37 on
Thu Jun 26 10:15:12 2014
%perl options:'openslide.i -outfile=mHeader.m
-thunkfile=libopenslide0x2D0_thunk_glnxa64.c -header=openslide.h'
ival={cell(1,0)}; % change 0 to the actual number of functions to
preallocate the data.
structs=[];enuminfo=[];fcnNum=1;
fcns=struct('name',ival,'calltype',ival,'LHS',ival,'RHS',ival,'alias',ival,'thunkname',
ival);
MfilePath=fileparts(mfilename('fullpath'));
ThunkLibName=fullfile(MfilePath,'libopenslide0x2D0_thunk_glnxa64');
% __attribute__ (( visibility (" default "))) _Bool openslide_can_open (
const char * filename );
fcns.thunkname{fcnNum}='(visibility("default")))_Boolopenslide_can_open(char*filenameThunk';
fcns.name{fcnNum}='__attribute__'; fcns.alias{fcnNum}='attribute__';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}='error';
fcns.RHS{fcnNum}={'error'};fcnNum=fcnNum+1;
% __attribute__ (( visibility (" default "))) openslide_t * openslide_open
( const char * filename );
fcns.thunkname{fcnNum}='(visibility("default")))openslide_t*openslide_open(char*filenameThunk';
fcns.name{fcnNum}='__attribute__'; fcns.alias{fcnNum}='attribute__';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}='error';
fcns.RHS{fcnNum}={'error'};fcnNum=fcnNum+1;
% __attribute__ (( visibility (" default "))) int32_t
openslide_get_level_count ( openslide_t * osr );
fcns.thunkname{fcnNum}='(visibility("default")))int32_topenslide_get_level_count(openslide_t*osrThunk';
fcns.name{fcnNum}='__attribute__'; fcns.alias{fcnNum}='attribute__';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}='error';
fcns.RHS{fcnNum}={'error'};fcnNum=fcnNum+1;
% __attribute__ (( visibility (" default "))) void openslide_close (
openslide_t * osr );
fcns.thunkname{fcnNum}='(visibility("default")))voidopenslide_close(openslide_t*osrThunk';
fcns.name{fcnNum}='__attribute__'; fcns.alias{fcnNum}='attribute__';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}='error';
fcns.RHS{fcnNum}={'error'};fcnNum=fcnNum+1;
% __attribute__ (( visibility (" default "))) const char *
openslide_get_error ( openslide_t * osr );
fcns.thunkname{fcnNum}='(visibility("default")))char*openslide_get_error(openslide_t*osrThunk';
fcns.name{fcnNum}='__attribute__'; fcns.alias{fcnNum}='attribute__';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}='error';
fcns.RHS{fcnNum}={'error'};fcnNum=fcnNum+1;
% __attribute__ (( visibility (" default "))) const char * const *
openslide_get_property_names ( openslide_t * osr );
fcns.thunkname{fcnNum}='(visibility("default")))char*const*openslide_get_property_names(openslide_t*osrThunk';
fcns.name{fcnNum}='__attribute__'; fcns.alias{fcnNum}='attribute__';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}='error';
fcns.RHS{fcnNum}={'error'};fcnNum=fcnNum+1;
% __attribute__ (( visibility (" default "))) const char * const *
openslide_get_associated_image_names ( openslide_t * osr );
fcns.thunkname{fcnNum}='(visibility("default")))char*const*openslide_get_associated_image_names(openslide_t*osrThunk';
fcns.name{fcnNum}='__attribute__'; fcns.alias{fcnNum}='attribute__';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}='error';
fcns.RHS{fcnNum}={'error'};fcnNum=fcnNum+1;
% __attribute__ (( visibility (" default "))) const char *
openslide_get_version ( void );
fcns.thunkname{fcnNum}='(visibility("default")))char*openslide_get_version(voidThunk';
fcns.name{fcnNum}='__attribute__'; fcns.alias{fcnNum}='attribute__';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}='error';
fcns.RHS{fcnNum}={'error'};fcnNum=fcnNum+1;
% __attribute__ (( visibility (" default "))) __attribute__ (( deprecated
(" Use " " openslide_get_level_count " " instead "))) int32_t
openslide_get_layer_count ( openslide_t * osr );
fcns.thunkname{fcnNum}='(visibility("default")))__attribute__((deprecated("Use""openslide_get_level_count""instead")))int32_topenslide_get_layer_count(openslide_t*osrThunk';
fcns.name{fcnNum}='__attribute__'; fcns.alias{fcnNum}='attribute__';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}='error';
fcns.RHS{fcnNum}={'error'};fcnNum=fcnNum+1;
% int _openslide_give_prefetch_hint_UNIMPLEMENTED ( void );
fcns.thunkname{fcnNum}='int32voidThunk';fcns.name{fcnNum}='_openslide_give_prefetch_hint_UNIMPLEMENTED';
fcns.alias{fcnNum}='openslide_give_prefetch_hint_UNIMPLEMENTED';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}='int32';
fcns.RHS{fcnNum}=[];fcnNum=fcnNum+1;
% void _openslide_cancel_prefetch_hint_UNIMPLEMENTED ( void );
fcns.thunkname{fcnNum}='voidvoidThunk';fcns.name{fcnNum}='_openslide_cancel_prefetch_hint_UNIMPLEMENTED';
fcns.alias{fcnNum}='openslide_cancel_prefetch_hint_UNIMPLEMENTED';
fcns.calltype{fcnNum}='Thunk'; fcns.LHS{fcnNum}=[];
fcns.RHS{fcnNum}=[];fcnNum=fcnNum+1;
structs.s_openslide.members=struct('');
methodinfo=fcns;

*2. after editing openslide-features.h to remove the space, I ran
openslide_load_library and got a similar error as before:*

Warning: Warnings messages were produced while parsing.  Check the
functions you intend to
use for correctness.  Warning text can be viewed using:
 [notfound,warnings]=loadlibrary(...)
> In loadlibrary at 344
  In openslide_load_library at 40
Error loading library intermediate output follows.
The actual error is at the end of this output.
*********