NDPI support

Mathieu Malaterre mathieu.malaterre at gmail.com
Tue Jul 17 08:48:15 EDT 2012


It seems to go a little further. Here is what I have:

Reading IFDs
Populating metadata
Populating OME metadata
java.lang.OutOfMemoryError: Java heap space
Dumping heap to java_pid16739.hprof ...
Heap dump file created [673548853 bytes in 0.278 secs]
Exception in thread "main" java.lang.OutOfMemoryError: Java heap space
	at loci.formats.gui.AWTImageTools.makeRGBImage(AWTImageTools.java:576)
	at loci.formats.gui.AWTImageTools.makeImage(AWTImageTools.java:207)
	at loci.formats.gui.AWTImageTools.makeImage(AWTImageTools.java:494)
	at loci.formats.gui.AWTImageTools.openImage(AWTImageTools.java:782)
	at loci.formats.gui.BufferedImageReader.openImage(BufferedImageReader.java:94)
	at loci.formats.gui.BufferedImageReader.openImage(BufferedImageReader.java:77)
	at loci.formats.gui.ImageViewer.open(ImageViewer.java:347)
	at loci.formats.gui.ImageViewer.main(ImageViewer.java:829)


Using:

$ cat bfview
[...]
  java -XX:+HeapDumpOnOutOfMemoryError -Xmx1024m -cp
"$DIR":"$DIR/bio-formats.jar":"$DIR/loci_tools.jar" $PROG "$@"

-- 
Mathieu


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