MIRAX read_slide_position_file

Marco Feuerstein feuerste at cs.tum.edu
Fri Jul 30 15:00:25 EDT 2010


Hi Adam,

Thanks for your quick reply.
Attached (see outData0019.txt) is the output of the python script run on the file causing problems in openslide.

I hope this helps.

Thanks again for your help!
Marco

> Interesting! What this means is that the format is not what we were
> expecting.
> In all files that I have seen so far, that 'zz' value is always 0.
> 
> 
> Can you try running a python program on your mirax data? It will dump
> these
> structures for analysis. You can pull it from git, it's here:
> 
> http://openslide.cs.cmu.edu/cgi-
> bin/gitweb.cgi?p=openslide.git;a=blob_plain;f=misc/decode-trestle-tile-
> position.py;hb=HEAD
> 
> 
> Just run it on the correct DataXXXX.dat files, it's usually one of the
> files after 14 or so. You may have to try a few. It will tell you if
> the file size doesn't match. You'll know if it's right if the numbers
> look like XY coordinates. Try posting that file here.
> 
> 
> 
> Thanks,
> 
> Adam

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