MIRAX read_slide_position_file

Adam Goode agoode at andrew.cmu.edu
Fri Jul 30 15:12:24 EDT 2010

Oops! I sent you the wrong file:

Try this one, it will work much better :)



On 07/30/2010 03:00 PM, Marco Feuerstein wrote:
> Hi Adam,
> Thanks for your quick reply.
> Attached (see outData0019.txt) is the output of the python script run on the file causing problems in openslide.
> I hope this helps.
> Thanks again for your help!
> Marco
>> Interesting! What this means is that the format is not what we were
>> expecting.
>> In all files that I have seen so far, that 'zz' value is always 0.
>> Can you try running a python program on your mirax data? It will dump
>> these
>> structures for analysis. You can pull it from git, it's here:
>> http://openslide.cs.cmu.edu/cgi-
>> bin/gitweb.cgi?p=openslide.git;a=blob_plain;f=misc/decode-trestle-tile-
>> position.py;hb=HEAD
>> Just run it on the correct DataXXXX.dat files, it's usually one of the
>> files after 14 or so. You may have to try a few. It will tell you if
>> the file size doesn't match. You'll know if it's right if the numbers
>> look like XY coordinates. Try posting that file here.
>> Thanks,
>> Adam

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