MIRAX read_slide_position_file
Adam Goode
agoode at andrew.cmu.edu
Fri Jul 30 15:12:24 EDT 2010
Oops! I sent you the wrong file:
Try this one, it will work much better :)
http://openslide.cs.cmu.edu/cgi-bin/gitweb.cgi?p=openslide.git;a=blob_plain;f=misc/decode-mirax-tile-position.py;hb=HEAD
Adam
On 07/30/2010 03:00 PM, Marco Feuerstein wrote:
> Hi Adam,
>
> Thanks for your quick reply.
> Attached (see outData0019.txt) is the output of the python script run on the file causing problems in openslide.
>
> I hope this helps.
>
> Thanks again for your help!
> Marco
>
>> Interesting! What this means is that the format is not what we were
>> expecting.
>> In all files that I have seen so far, that 'zz' value is always 0.
>>
>>
>> Can you try running a python program on your mirax data? It will dump
>> these
>> structures for analysis. You can pull it from git, it's here:
>>
>> http://openslide.cs.cmu.edu/cgi-
>> bin/gitweb.cgi?p=openslide.git;a=blob_plain;f=misc/decode-trestle-tile-
>> position.py;hb=HEAD
>>
>>
>> Just run it on the correct DataXXXX.dat files, it's usually one of the
>> files after 14 or so. You may have to try a few. It will tell you if
>> the file size doesn't match. You'll know if it's right if the numbers
>> look like XY coordinates. Try posting that file here.
>>
>>
>>
>> Thanks,
>>
>> Adam
>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 261 bytes
Desc: OpenPGP digital signature
Url : http://lists.andrew.cmu.edu/pipermail/openslide-users/attachments/20100730/f2dd4c60/attachment.bin
More information about the openslide-users
mailing list