OpenSlide & annotations?

[kris kvilekval]

Hi, 

  I was going to announce it here when we release to stable, but based
on the question I thought it might be worthwhile to let you know 
sooner.

We have integrated openslide into our online platform for bioimage
management, annotation, and analysis (BISQUE) developed by the 
center for bioimage informatics at UCSB. 

BISQUE supports over 200+ bioimaging formats including 5D imaging (3D +
time + multi-channel) and is very scalable.  Bisque allows graphical
and textual annotations and can link data into complex graphs that are
searchable and analyzible. Analysis, provenance and flexible data
modeling are core to bisque.

More info here:
http://www.bioimage.ucsb.edu/bisque

We will deploy an openslide-enabled bisque to stable sometime next week
and it will be available full-time at http://bisque.ece.ucsb.edu (our
main bisque server) for public use.  We are wrapping up or 0.55 release
this week.

I will post a note here when we go online next week.


 

On Tue, 2014-03-11 at 11:48 -0600, Mark Ungrin wrote:
> What additional work would be required for OpenSlide to support
> annotations (ideally in the web browser)?
> 
> thanks
> 
> Mark
> -- 
> Dr. Mark Ungrin, Ph.D.
> Assistant Professor
> Department of Comparative Biology & Experimental Medicine
> HMRB 320, 3330 Hospital Drive NW
> Calgary, AB  T2N 4N1
> University of Calgary, Faculty of Veterinary Medicine
> 
> Email: mark.ungrin at ucalgary.ca
> http://www.ucalgary.ca/ungrinlab
> 
> office: 403.210.6203
> cell: 403.561.6817
> lab: 403.210.6545
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