<div dir="ltr">Hi and thanks for hasty reply,<div><br></div><div>In detail I want to scale down a mrxs-file to level 1, 2, 3, and save as jpeg-compressed, pyramidal tiff.</div><div>Using </div><div><br></div><div>$vips openslideload --level 3 MIRAX_SLIDE.mrxs slide.tiff[tile,compression=lzw]</div><div><br></div><div>I get a single layer based on level 3 from original file, in lzw-compression.</div><div><br></div><div>It took me a while to realise that it was single layer so I would have to restructure the new file to a pyramidal format. Unfortunately, I attempted using ImageMagick to do this, and that's the one that seems produce an unreadable file for openslide:</div><div><br></div><div>$ convert level_3_slide.tiff -compress jpeg -quality 90 -define tiff:tile-geometry=256x256 ptif:output_im.tiff<br></div><div><br></div><div><br></div><div><div>$ openslide-write-png output_im.tiff 7500 15000 2 500 500 testImg.png</div><div>output_im.tiff: 0: Invalid tile byte count, tile 219.</div><div>openslide-write-png: TIFFRGBAImageGet failed</div></div><div><br></div><div>I just realised that VIPS succeeds:</div><div><br></div><div>$ vips --vips-progress tiffsave slide.tiff output.tiff --compression=deflate --tile --tile-width=256 --tile-height<br></div><div><br></div><div>$ openslide-write-png output.tiff 7500 15000 2 500 500 testImg.png #(no complaints)</div><div><br></div><div>Similarly, the convert-via-VIPS is readable through the Openslide Python Deepzoom server, but not the convert-via-ImageMagick.</div><div><br></div><div>Kind regards,</div><div>Jonas Ogaard</div><div><br></div><div><br></div><div>Below are description of the different stages of conversion, both described by IM and Openslide:</div><div><br></div><div>---------------------------------------MRXS-Layer3-to-tiff-converted Slide---------------------------------------<br></div><div><br></div><div><div>$ identify level_3_slide.tiff</div><div>level_3_slide.tiff TIFF 14621x30681 14621x30681+0+0 8-bit sRGB 27.15MB 0.000u 0:00.079</div><div><br></div><div>$ openslide-show-properties level_3_slide.tiff</div><div>openslide.level-count: '1'</div><div>openslide.level[0].downsample: '1'</div><div>openslide.level[0].height: '30681'</div><div>openslide.level[0].tile-height: '128'</div><div>openslide.level[0].tile-width: '128'</div><div>openslide.level[0].width: '14621'</div><div>openslide.vendor: 'generic-tiff'</div><div>tiff.ResolutionUnit: 'centimeter'</div><div>tiff.XResolution: '10'</div><div>tiff.YResolution: '10'</div></div><div><br></div><div>---------------------------------------VIPS-via-ImageMagick-converted Slide---------------------------------------<br></div><div><br></div><div><div>$ identify output_im.tiff</div><div>output_im.tiff[0] TIFF 14621x30681 14621x30681+0+0 8-bit sRGB 80.5KB 0.010u 0:00.000</div><div>output_im.tiff[1] TIFF 7310x15340 7310x15340+0+0 8-bit sRGB 80.5KB 0.000u 0:00.010</div><div>output_im.tiff[2] TIFF 3655x7670 3655x7670+0+0 8-bit sRGB 80.5KB 0.000u 0:00.010</div><div>output_im.tiff[3] TIFF 1827x3835 1827x3835+0+0 8-bit sRGB 80.5KB 0.000u 0:00.010</div><div>output_im.tiff[4] TIFF 913x1917 913x1917+0+0 8-bit sRGB 80.5KB 0.000u 0:00.010</div><div>output_im.tiff[5] TIFF 456x958 456x958+0+0 8-bit sRGB 80.5KB 0.000u 0:00.010</div><div>output_im.tiff[6] TIFF 228x479 228x479+0+0 8-bit sRGB 80.5KB 0.000u 0:00.010</div><div>output_im.tiff[7] TIFF 114x239 114x239+0+0 8-bit sRGB 80.5KB 0.000u 0:00.010</div><div>output_im.tiff[8] TIFF 57x119 57x119+0+0 8-bit sRGB 80.5KB 0.000u 0:00.010</div></div><div><br></div><div><div>$ openslide-show-properties output_im.tiff</div><div>openslide.level-count: '9'</div><div>openslide.level[0].downsample: '1'</div><div>openslide.level[0].height: '30681'</div><div>openslide.level[0].tile-height: '256'</div><div>openslide.level[0].tile-width: '256'</div><div>openslide.level[0].width: '14621'</div><div>openslide.level[1].downsample: '2.0001009939769245'</div><div>openslide.level[1].height: '15340'</div><div>openslide.level[1].tile-height: '256'</div><div>openslide.level[1].tile-width: '256'</div><div>openslide.level[1].width: '7310'</div><div>openslide.level[2].downsample: '4.0002019879538491'</div><div>openslide.level[2].height: '7670'</div><div>openslide.level[2].tile-height: '256'</div><div>openslide.level[2].tile-width: '256'</div><div>openslide.level[2].width: '3655'</div><div>openslide.level[3].downsample: '8.0014987415338084'</div><div>openslide.level[3].height: '3835'</div><div>openslide.level[3].tile-height: '256'</div><div>openslide.level[3].tile-width: '256'</div><div>openslide.level[3].width: '1827'</div><div>openslide.level[4].downsample: '16.009466804477835'</div><div>openslide.level[4].height: '1917'</div><div>openslide.level[4].tile-height: '256'</div><div>openslide.level[4].tile-width: '256'</div><div>openslide.level[4].width: '913'</div><div>openslide.level[5].downsample: '32.044846262315495'</div><div>openslide.level[5].height: '958'</div><div>openslide.level[5].tile-height: '256'</div><div>openslide.level[5].tile-width: '256'</div><div>openslide.level[5].width: '456'</div><div>openslide.level[6].downsample: '64.089692524630991'</div><div>openslide.level[6].height: '479'</div><div>openslide.level[6].tile-height: '256'</div><div>openslide.level[6].tile-width: '256'</div><div>openslide.level[6].width: '228'</div><div>openslide.level[7].downsample: '128.31338545107539'</div><div>openslide.level[7].height: '239'</div><div>openslide.level[7].tile-height: '256'</div><div>openslide.level[7].tile-width: '256'</div><div>openslide.level[7].width: '114'</div><div>openslide.level[8].downsample: '257.16615067079465'</div><div>openslide.level[8].height: '119'</div><div>openslide.level[8].tile-height: '256'</div><div>openslide.level[8].tile-width: '256'</div><div>openslide.level[8].width: '57'</div><div>openslide.quickhash-1: '6dbc01af8348b39038277fd9cb161100140383011b9fa43beaf581de0f0daa56'</div><div>openslide.vendor: 'generic-tiff'</div><div>tiff.ResolutionUnit: 'centimeter'</div><div>tiff.XResolution: '10'</div><div>tiff.YResolution: '10'</div></div><div><br></div><div>---------------------------------------VIPS-via-VIPS-converted Slide---------------------------------------<br></div><div><br></div><div><div>$ identify output.tiff</div><div>output.tiff[0] TIFF 14621x30681 14621x30681+0+0 8-bit sRGB 20.2MB 0.000u 0:00.000</div><div>output.tiff[1] TIFF 7310x15340 7310x15340+0+0 8-bit sRGB 20.2MB 0.000u 0:00.009</div><div>output.tiff[2] TIFF 3655x7670 3655x7670+0+0 8-bit sRGB 20.2MB 0.000u 0:00.009</div><div>output.tiff[3] TIFF 1827x3835 1827x3835+0+0 8-bit sRGB 20.2MB 0.000u 0:00.009</div><div>output.tiff[4] TIFF 913x1917 913x1917+0+0 8-bit sRGB 20.2MB 0.000u 0:00.009</div><div>output.tiff[5] TIFF 456x958 456x958+0+0 8-bit sRGB 20.2MB 0.000u 0:00.009</div><div>output.tiff[6] TIFF 228x479 228x479+0+0 8-bit sRGB 20.2MB 0.000u 0:00.009</div><div>output.tiff[7] TIFF 114x239 114x239+0+0 8-bit sRGB 20.2MB 0.000u 0:00.009</div><div><br></div><div>$ openslide-show-properties output.tiff</div><div>openslide.level-count: '8'</div><div>openslide.level[0].downsample: '1'</div><div>openslide.level[0].height: '30681'</div><div>openslide.level[0].tile-height: '256'</div><div>openslide.level[0].tile-width: '256'</div><div>openslide.level[0].width: '14621'</div><div>openslide.level[1].downsample: '2.0001009939769245'</div><div>openslide.level[1].height: '15340'</div><div>openslide.level[1].tile-height: '256'</div><div>openslide.level[1].tile-width: '256'</div><div>openslide.level[1].width: '7310'</div><div>openslide.level[2].downsample: '4.0002019879538491'</div><div>openslide.level[2].height: '7670'</div><div>openslide.level[2].tile-height: '256'</div><div>openslide.level[2].tile-width: '256'</div><div>openslide.level[2].width: '3655'</div><div>openslide.level[3].downsample: '8.0014987415338084'</div><div>openslide.level[3].height: '3835'</div><div>openslide.level[3].tile-height: '256'</div><div>openslide.level[3].tile-width: '256'</div><div>openslide.level[3].width: '1827'</div><div>openslide.level[4].downsample: '16.009466804477835'</div><div>openslide.level[4].height: '1917'</div><div>openslide.level[4].tile-height: '256'</div><div>openslide.level[4].tile-width: '256'</div><div>openslide.level[4].width: '913'</div><div>openslide.level[5].downsample: '32.044846262315495'</div><div>openslide.level[5].height: '958'</div><div>openslide.level[5].tile-height: '256'</div><div>openslide.level[5].tile-width: '256'</div><div>openslide.level[5].width: '456'</div><div>openslide.level[6].downsample: '64.089692524630991'</div><div>openslide.level[6].height: '479'</div><div>openslide.level[6].tile-height: '256'</div><div>openslide.level[6].tile-width: '256'</div><div>openslide.level[6].width: '228'</div><div>openslide.level[7].downsample: '128.31338545107539'</div><div>openslide.level[7].height: '239'</div><div>openslide.level[7].tile-height: '256'</div><div>openslide.level[7].tile-width: '256'</div><div>openslide.level[7].width: '114'</div><div>openslide.quickhash-1: '681fafb09c1ee7f12034d5bb45a60643e678eb4a4c6752a99d613309ab1362f7'</div><div>openslide.vendor: 'generic-tiff'</div><div>tiff.ResolutionUnit: 'centimeter'</div><div>tiff.XResolution: '10'</div><div>tiff.YResolution: '10'</div></div><div><br></div><div>---------------------------------------------Original Slide---------------------------------------------</div><div><div>$ openslide-show-properties MIRAX_SLIDE.mrxs</div><div>mirax.DATAFILE.FILE_0: 'Data0000.dat'</div><div>mirax.DATAFILE.FILE_1: 'Data0001.dat'</div><div>mirax.DATAFILE.FILE_10: 'Data0010.dat'</div><div>mirax.DATAFILE.FILE_11: 'Data0011.dat'</div><div>mirax.DATAFILE.FILE_12: 'Data0012.dat'</div><div>mirax.DATAFILE.FILE_13: 'Data0013.dat'</div><div>mirax.DATAFILE.FILE_14: 'Data0014.dat'</div><div>mirax.DATAFILE.FILE_15: 'Data0015.dat'</div><div>mirax.DATAFILE.FILE_16: 'Data0016.dat'</div><div>mirax.DATAFILE.FILE_17: 'Data0017.dat'</div><div>mirax.DATAFILE.FILE_18: 'Data0018.dat'</div><div>mirax.DATAFILE.FILE_19: 'Data0019.dat'</div><div>mirax.DATAFILE.FILE_2: 'Data0002.dat'</div><div>mirax.DATAFILE.FILE_20: 'Data0020.dat'</div><div>mirax.DATAFILE.FILE_21: 'Data0021.dat'</div><div>mirax.DATAFILE.FILE_22: 'Data0022.dat'</div><div>mirax.DATAFILE.FILE_23: 'Data0023.dat'</div><div>mirax.DATAFILE.FILE_24: 'Data0024.dat'</div><div>mirax.DATAFILE.FILE_3: 'Data0003.dat'</div><div>mirax.DATAFILE.FILE_4: 'Data0004.dat'</div><div>mirax.DATAFILE.FILE_5: 'Data0005.dat'</div><div>mirax.DATAFILE.FILE_6: 'Data0006.dat'</div><div>mirax.DATAFILE.FILE_7: 'Data0007.dat'</div><div>mirax.DATAFILE.FILE_8: 'Data0008.dat'</div><div>mirax.DATAFILE.FILE_9: 'Data0009.dat'</div><div>mirax.DATAFILE.FILE_COUNT: '25'</div><div>mirax.GENERAL.ADAPTER_SIZE: '1'</div><div>mirax.GENERAL.CAMERA_TYPE: 'Zeiss ICc1 or Marlin F146C'</div><div>mirax.GENERAL.CURRENT_SLIDE_VERSION: '1.9'</div><div>mirax.GENERAL.CameraImageDivisionsPerSide: '2'</div><div>mirax.GENERAL.IMAGENUMBER_X: '292'</div><div>mirax.GENERAL.IMAGENUMBER_Y: '876'</div><div>mirax.GENERAL.IMAGE_OVERLAP_MICROMETERS_X: '0'</div><div>mirax.GENERAL.IMAGE_OVERLAP_MICROMETERS_Y: '0'</div><div>mirax.GENERAL.OBJECTIVE_MAGNIFICATION: '20'</div><div>mirax.GENERAL.OBJECTIVE_NAME: 'Plan-Apochromat'</div><div>mirax.GENERAL.OPTOVAR_SIZE: '1.60000002384186'</div><div>mirax.GENERAL.PROJECT_NAME: 'ProjectName'</div><div>mirax.GENERAL.SLIDE_CONTENT: 'DIGITAL_SLIDE'</div><div>mirax.GENERAL.SLIDE_CREATIONDATETIME: '05/09/2014 08:22:36'</div><div>mirax.GENERAL.SLIDE_ID: 'A256B35245064907A6A27B43A760E3AB'</div><div>mirax.GENERAL.SLIDE_NAME: '5_7N_V_V'</div><div>mirax.GENERAL.SLIDE_POSITION_X: '0'</div><div>mirax.GENERAL.SLIDE_POSITION_Y: '0'</div><div>mirax.GENERAL.SLIDE_TYPE: 'SLIDE_TYPE_BRIGHTFIELD'</div><div>mirax.GENERAL.SLIDE_VERSION: '01.02'</div><div>mirax.GENERAL.VIMSLIDE_CP_BRIGHTNESS: '0'</div><div>mirax.GENERAL.VIMSLIDE_CP_COLOR_BALANCE_BLUE: '0'</div><div>mirax.GENERAL.VIMSLIDE_CP_COLOR_BALANCE_GREEN: '0'</div><div>mirax.GENERAL.VIMSLIDE_CP_COLOR_BALANCE_RED: '0'</div><div>mirax.GENERAL.VIMSLIDE_CP_CONTRAST: '0'</div><div>mirax.GENERAL.VIMSLIDE_CP_GAMMA: '1'</div><div>mirax.GENERAL.VIMSLIDE_SLIDE_FLIPHORZ: 'False'</div><div>mirax.GENERAL.VIMSLIDE_SLIDE_FLIPVERT: 'False'</div><div>mirax.GENERAL.VIMSLIDE_SLIDE_ROTATION: '360'</div><div>mirax.HIERARCHICAL.HIER_0_COUNT: '10'</div><div>mirax.HIERARCHICAL.HIER_0_DEFAULT: '0'</div><div>mirax.HIERARCHICAL.HIER_0_NAME: 'Slide zoom level'</div><div>mirax.HIERARCHICAL.HIER_0_SECTION: 'LAYER_0_SECTION'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_0: 'ZoomLevel_0'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_0_SECTION: 'LAYER_0_LEVEL_0_SECTION'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_1: 'ZoomLevel_1'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_1_SECTION: 'LAYER_0_LEVEL_1_SECTION'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_2: 'ZoomLevel_2'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_2_SECTION: 'LAYER_0_LEVEL_2_SECTION'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_3: 'ZoomLevel_3'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_3_SECTION: 'LAYER_0_LEVEL_3_SECTION'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_4: 'ZoomLevel_4'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_4_SECTION: 'LAYER_0_LEVEL_4_SECTION'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_5: 'ZoomLevel_5'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_5_SECTION: 'LAYER_0_LEVEL_5_SECTION'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_6: 'ZoomLevel_6'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_6_SECTION: 'LAYER_0_LEVEL_6_SECTION'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_7: 'ZoomLevel_7'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_7_SECTION: 'LAYER_0_LEVEL_7_SECTION'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_8: 'ZoomLevel_8'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_8_SECTION: 'LAYER_0_LEVEL_8_SECTION'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_9: 'ZoomLevel_9'</div><div>mirax.HIERARCHICAL.HIER_0_VAL_9_SECTION: 'LAYER_0_LEVEL_9_SECTION'</div><div>mirax.HIERARCHICAL.HIER_1_COUNT: '3'</div><div>mirax.HIERARCHICAL.HIER_1_DEFAULT: '0'</div><div>mirax.HIERARCHICAL.HIER_1_NAME: 'Slide filter level'</div><div>mirax.HIERARCHICAL.HIER_1_SECTION: 'LAYER_1_SECTION'</div><div>mirax.HIERARCHICAL.HIER_1_VAL_0: 'FilterLevel_0'</div><div>mirax.HIERARCHICAL.HIER_1_VAL_0_SECTION: 'LAYER_1_LEVEL_0_SECTION'</div><div>mirax.HIERARCHICAL.HIER_1_VAL_1: 'FilterLevel_1'</div><div>mirax.HIERARCHICAL.HIER_1_VAL_1_SECTION: 'LAYER_1_LEVEL_1_SECTION'</div><div>mirax.HIERARCHICAL.HIER_1_VAL_2: 'FilterLevel_2'</div><div>mirax.HIERARCHICAL.HIER_1_VAL_2_SECTION: 'LAYER_1_LEVEL_2_SECTION'</div><div>mirax.HIERARCHICAL.HIER_2_COUNT: '2'</div><div>mirax.HIERARCHICAL.HIER_2_DEFAULT: '0'</div><div>mirax.HIERARCHICAL.HIER_2_NAME: 'Scan info layer'</div><div>mirax.HIERARCHICAL.HIER_2_SECTION: 'LAYER_2_SECTION'</div><div>mirax.HIERARCHICAL.HIER_2_VAL_0: 'ScanInfoLayer_DefaultLevel'</div><div>mirax.HIERARCHICAL.HIER_2_VAL_0_SECTION: 'LAYER_2_LEVEL_0_SECTION'</div><div>mirax.HIERARCHICAL.HIER_2_VAL_1: 'ScanInfoLayer_XMLInfoLevel'</div><div>mirax.HIERARCHICAL.HIER_2_VAL_1_SECTION: 'LAYER_2_LEVEL_1_SECTION'</div><div>mirax.HIERARCHICAL.HIER_COUNT: '3'</div><div>mirax.HIERARCHICAL.INDEXFILE: 'Index.dat'</div><div>mirax.HIERARCHICAL.NONHIER_0_COUNT: '10'</div><div>mirax.HIERARCHICAL.NONHIER_0_NAME: 'Scan data layer'</div><div>mirax.HIERARCHICAL.NONHIER_0_SECTION: 'NONHIERLAYER_0_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_0: 'ScanDataLayer_ScanMap'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_0_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_0_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_0_SECTION: 'NONHIERLAYER_0_LEVEL_0_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_1: 'ScanDataLayer_XMLInfoHeader'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_1_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_1_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_1_SECTION: 'NONHIERLAYER_0_LEVEL_1_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_2: 'ScanDataLayer_SlideThumbnail'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_2_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_2_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_2_SECTION: 'NONHIERLAYER_0_LEVEL_2_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_3: 'ScanDataLayer_SlideBarcode'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_3_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_3_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_3_SECTION: 'NONHIERLAYER_0_LEVEL_3_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_4: 'ScanDataLayer_SlidePreview'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_4_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_4_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_4_SECTION: 'NONHIERLAYER_0_LEVEL_4_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_5: 'ScanDataLayer_StagePositionMap'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_5_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_5_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_5_SECTION: 'NONHIERLAYER_0_LEVEL_5_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_6: 'ScanDataLayer_Empty'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_6_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_6_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_6_SECTION: 'NONHIERLAYER_0_LEVEL_6_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_7: 'ProfileXMLHeader'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_7_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_7_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_7_SECTION: 'NONHIERLAYER_0_LEVEL_7_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_8: 'ProfileXML'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_8_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_8_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_8_SECTION: 'NONHIERLAYER_0_LEVEL_8_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_9: 'ScannedFOVsMap'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_9_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_9_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_0_VAL_9_SECTION: 'NONHIERLAYER_0_LEVEL_9_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_1_COUNT: '1'</div><div>mirax.HIERARCHICAL.NONHIER_1_NAME: 'VIMSLIDE_HISTOGRAM_DATA'</div><div>mirax.HIERARCHICAL.NONHIER_1_SECTION: 'NONHIERLAYER_1_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_1_VAL_0: 'default'</div><div>mirax.HIERARCHICAL.NONHIER_1_VAL_0_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_1_VAL_0_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_1_VAL_0_SECTION: 'NONHIERLAYER_1_LEVEL_0_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_2_COUNT: '1'</div><div>mirax.HIERARCHICAL.NONHIER_2_NAME: 'StitchingLayer'</div><div>mirax.HIERARCHICAL.NONHIER_2_SECTION: 'NONHIERLAYER_2_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_2_VAL_0: 'DataLevel_V1.0'</div><div>mirax.HIERARCHICAL.NONHIER_2_VAL_0_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_2_VAL_0_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_2_VAL_0_SECTION: 'NONHIERLAYER_2_LEVEL_0_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_3_COUNT: '1'</div><div>mirax.HIERARCHICAL.NONHIER_3_NAME: 'VIMSLIDE_POSITION_BUFFER'</div><div>mirax.HIERARCHICAL.NONHIER_3_SECTION: 'NONHIERLAYER_3_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_3_VAL_0: 'default'</div><div>mirax.HIERARCHICAL.NONHIER_3_VAL_0_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_3_VAL_0_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_3_VAL_0_SECTION: 'NONHIERLAYER_3_LEVEL_0_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_4_COUNT: '1'</div><div>mirax.HIERARCHICAL.NONHIER_4_NAME: 'VIM_PREVIEW_LAYER'</div><div>mirax.HIERARCHICAL.NONHIER_4_SECTION: 'NONHIERLAYER_4_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_4_VAL_0: 'default'</div><div>mirax.HIERARCHICAL.NONHIER_4_VAL_0_IMAGENUMBER_X: '1'</div><div>mirax.HIERARCHICAL.NONHIER_4_VAL_0_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_4_VAL_0_SECTION: 'NONHIERLAYER_4_LEVEL_0_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_5_COUNT: '1'</div><div>mirax.HIERARCHICAL.NONHIER_5_NAME: 'Slide object layer'</div><div>mirax.HIERARCHICAL.NONHIER_5_SECTION: 'NONHIERLAYER_5_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_5_VAL_0: 'SlideObjectLayer_SlideFlag'</div><div>mirax.HIERARCHICAL.NONHIER_5_VAL_0_IMAGENUMBER_X: '2'</div><div>mirax.HIERARCHICAL.NONHIER_5_VAL_0_IMAGENUMBER_Y: '1'</div><div>mirax.HIERARCHICAL.NONHIER_5_VAL_0_SECTION: 'NONHIERLAYER_5_LEVEL_0_SECTION'</div><div>mirax.HIERARCHICAL.NONHIER_COUNT: '6'</div><div>mirax.HIERARCHICAL.PAGEELEMENTCOUNT: '128'</div><div>mirax.HIERARCHICAL.PAGELENGTH: '2048'</div><div>mirax.LAYER_0_LEVEL_0_SECTION.DIGITIZER_HEIGHT: '364'</div><div>mirax.LAYER_0_LEVEL_0_SECTION.DIGITIZER_WIDTH: '484'</div><div>mirax.LAYER_0_LEVEL_0_SECTION.IMAGE_COMPRESSION_FACTOR: '90'</div><div>mirax.LAYER_0_LEVEL_0_SECTION.IMAGE_CONCAT_FACTOR: '0'</div><div>mirax.LAYER_0_LEVEL_0_SECTION.IMAGE_FILL_COLOR_BGR: '16777215'</div><div>mirax.LAYER_0_LEVEL_0_SECTION.IMAGE_FORMAT: 'JPEG'</div><div>mirax.LAYER_0_LEVEL_0_SECTION.MICROMETER_PER_PIXEL_X: '0.205358984543218'</div><div>mirax.LAYER_0_LEVEL_0_SECTION.MICROMETER_PER_PIXEL_Y: '0.204395601349872'</div><div>mirax.LAYER_0_LEVEL_0_SECTION.OVERLAP_X: '168'</div><div>mirax.LAYER_0_LEVEL_0_SECTION.OVERLAP_Y: '168'</div><div>mirax.LAYER_0_LEVEL_1_SECTION.DIGITIZER_HEIGHT: '364'</div><div>mirax.LAYER_0_LEVEL_1_SECTION.DIGITIZER_WIDTH: '484'</div><div>mirax.LAYER_0_LEVEL_1_SECTION.IMAGE_COMPRESSION_FACTOR: '90'</div><div>mirax.LAYER_0_LEVEL_1_SECTION.IMAGE_CONCAT_FACTOR: '1'</div><div>mirax.LAYER_0_LEVEL_1_SECTION.IMAGE_FILL_COLOR_BGR: '16777215'</div><div>mirax.LAYER_0_LEVEL_1_SECTION.IMAGE_FORMAT: 'JPEG'</div><div>mirax.LAYER_0_LEVEL_1_SECTION.MICROMETER_PER_PIXEL_X: '0.410717969086436'</div><div>mirax.LAYER_0_LEVEL_1_SECTION.MICROMETER_PER_PIXEL_Y: '0.408791202699745'</div><div>mirax.LAYER_0_LEVEL_1_SECTION.OVERLAP_X: '84'</div><div>mirax.LAYER_0_LEVEL_1_SECTION.OVERLAP_Y: '84'</div><div>mirax.LAYER_0_LEVEL_2_SECTION.DIGITIZER_HEIGHT: '364'</div><div>mirax.LAYER_0_LEVEL_2_SECTION.DIGITIZER_WIDTH: '484'</div><div>mirax.LAYER_0_LEVEL_2_SECTION.IMAGE_COMPRESSION_FACTOR: '90'</div><div>mirax.LAYER_0_LEVEL_2_SECTION.IMAGE_CONCAT_FACTOR: '1'</div><div>mirax.LAYER_0_LEVEL_2_SECTION.IMAGE_FILL_COLOR_BGR: '16777215'</div><div>mirax.LAYER_0_LEVEL_2_SECTION.IMAGE_FORMAT: 'JPEG'</div><div>mirax.LAYER_0_LEVEL_2_SECTION.MICROMETER_PER_PIXEL_X: '0.821435938172873'</div><div>mirax.LAYER_0_LEVEL_2_SECTION.MICROMETER_PER_PIXEL_Y: '0.817582405399489'</div><div>mirax.LAYER_0_LEVEL_2_SECTION.OVERLAP_X: '42'</div><div>mirax.LAYER_0_LEVEL_2_SECTION.OVERLAP_Y: '42'</div><div>mirax.LAYER_0_LEVEL_3_SECTION.DIGITIZER_HEIGHT: '364'</div><div>mirax.LAYER_0_LEVEL_3_SECTION.DIGITIZER_WIDTH: '484'</div><div>mirax.LAYER_0_LEVEL_3_SECTION.IMAGE_COMPRESSION_FACTOR: '90'</div><div>mirax.LAYER_0_LEVEL_3_SECTION.IMAGE_CONCAT_FACTOR: '1'</div><div>mirax.LAYER_0_LEVEL_3_SECTION.IMAGE_FILL_COLOR_BGR: '16777215'</div><div>mirax.LAYER_0_LEVEL_3_SECTION.IMAGE_FORMAT: 'JPEG'</div><div>mirax.LAYER_0_LEVEL_3_SECTION.MICROMETER_PER_PIXEL_X: '1.64287187634575'</div><div>mirax.LAYER_0_LEVEL_3_SECTION.MICROMETER_PER_PIXEL_Y: '1.63516481079898'</div><div>mirax.LAYER_0_LEVEL_3_SECTION.OVERLAP_X: '21'</div><div>mirax.LAYER_0_LEVEL_3_SECTION.OVERLAP_Y: '21'</div><div>mirax.LAYER_0_LEVEL_4_SECTION.DIGITIZER_HEIGHT: '364'</div><div>mirax.LAYER_0_LEVEL_4_SECTION.DIGITIZER_WIDTH: '484'</div><div>mirax.LAYER_0_LEVEL_4_SECTION.IMAGE_COMPRESSION_FACTOR: '90'</div><div>mirax.LAYER_0_LEVEL_4_SECTION.IMAGE_CONCAT_FACTOR: '1'</div><div>mirax.LAYER_0_LEVEL_4_SECTION.IMAGE_FILL_COLOR_BGR: '16777215'</div><div>mirax.LAYER_0_LEVEL_4_SECTION.IMAGE_FORMAT: 'JPEG'</div><div>mirax.LAYER_0_LEVEL_4_SECTION.MICROMETER_PER_PIXEL_X: '3.28227777826882'</div><div>mirax.LAYER_0_LEVEL_4_SECTION.MICROMETER_PER_PIXEL_Y: '3.26571051196293'</div><div>mirax.LAYER_0_LEVEL_4_SECTION.OVERLAP_X: '10.5'</div><div>mirax.LAYER_0_LEVEL_4_SECTION.OVERLAP_Y: '10.5'</div><div>mirax.LAYER_0_LEVEL_5_SECTION.DIGITIZER_HEIGHT: '364'</div><div>mirax.LAYER_0_LEVEL_5_SECTION.DIGITIZER_WIDTH: '484'</div><div>mirax.LAYER_0_LEVEL_5_SECTION.IMAGE_COMPRESSION_FACTOR: '90'</div><div>mirax.LAYER_0_LEVEL_5_SECTION.IMAGE_CONCAT_FACTOR: '1'</div><div>mirax.LAYER_0_LEVEL_5_SECTION.IMAGE_FILL_COLOR_BGR: '16777215'</div><div>mirax.LAYER_0_LEVEL_5_SECTION.IMAGE_FORMAT: 'JPEG'</div><div>mirax.LAYER_0_LEVEL_5_SECTION.MICROMETER_PER_PIXEL_X: '6.56455555653764'</div><div>mirax.LAYER_0_LEVEL_5_SECTION.MICROMETER_PER_PIXEL_Y: '6.53142102392586'</div><div>mirax.LAYER_0_LEVEL_5_SECTION.OVERLAP_X: '5.25'</div><div>mirax.LAYER_0_LEVEL_5_SECTION.OVERLAP_Y: '5.25'</div><div>mirax.LAYER_0_LEVEL_6_SECTION.DIGITIZER_HEIGHT: '364'</div><div>mirax.LAYER_0_LEVEL_6_SECTION.DIGITIZER_WIDTH: '484'</div><div>mirax.LAYER_0_LEVEL_6_SECTION.IMAGE_COMPRESSION_FACTOR: '90'</div><div>mirax.LAYER_0_LEVEL_6_SECTION.IMAGE_CONCAT_FACTOR: '1'</div><div>mirax.LAYER_0_LEVEL_6_SECTION.IMAGE_FILL_COLOR_BGR: '16777215'</div><div>mirax.LAYER_0_LEVEL_6_SECTION.IMAGE_FORMAT: 'JPEG'</div><div>mirax.LAYER_0_LEVEL_6_SECTION.MICROMETER_PER_PIXEL_X: '13.1154917032069'</div><div>mirax.LAYER_0_LEVEL_6_SECTION.MICROMETER_PER_PIXEL_Y: '13.0447994483381'</div><div>mirax.LAYER_0_LEVEL_6_SECTION.OVERLAP_X: '2.625'</div><div>mirax.LAYER_0_LEVEL_6_SECTION.OVERLAP_Y: '2.625'</div><div>mirax.LAYER_0_LEVEL_7_SECTION.DIGITIZER_HEIGHT: '364'</div><div>mirax.LAYER_0_LEVEL_7_SECTION.DIGITIZER_WIDTH: '484'</div><div>mirax.LAYER_0_LEVEL_7_SECTION.IMAGE_COMPRESSION_FACTOR: '90'</div><div>mirax.LAYER_0_LEVEL_7_SECTION.IMAGE_CONCAT_FACTOR: '1'</div><div>mirax.LAYER_0_LEVEL_7_SECTION.IMAGE_FILL_COLOR_BGR: '16777215'</div><div>mirax.LAYER_0_LEVEL_7_SECTION.IMAGE_FORMAT: 'JPEG'</div><div>mirax.LAYER_0_LEVEL_7_SECTION.MICROMETER_PER_PIXEL_X: '26.2309834064139'</div><div>mirax.LAYER_0_LEVEL_7_SECTION.MICROMETER_PER_PIXEL_Y: '26.0895988966762'</div><div>mirax.LAYER_0_LEVEL_7_SECTION.OVERLAP_X: '1.3125'</div><div>mirax.LAYER_0_LEVEL_7_SECTION.OVERLAP_Y: '1.3125'</div><div>mirax.LAYER_0_LEVEL_8_SECTION.DIGITIZER_HEIGHT: '364'</div><div>mirax.LAYER_0_LEVEL_8_SECTION.DIGITIZER_WIDTH: '484'</div><div>mirax.LAYER_0_LEVEL_8_SECTION.IMAGE_COMPRESSION_FACTOR: '90'</div><div>mirax.LAYER_0_LEVEL_8_SECTION.IMAGE_CONCAT_FACTOR: '1'</div><div>mirax.LAYER_0_LEVEL_8_SECTION.IMAGE_FILL_COLOR_BGR: '16777215'</div><div>mirax.LAYER_0_LEVEL_8_SECTION.IMAGE_FORMAT: 'JPEG'</div><div>mirax.LAYER_0_LEVEL_8_SECTION.MICROMETER_PER_PIXEL_X: '52.4077705661203'</div><div>mirax.LAYER_0_LEVEL_8_SECTION.MICROMETER_PER_PIXEL_Y: '52.1075230711089'</div><div>mirax.LAYER_0_LEVEL_8_SECTION.OVERLAP_X: '0.65625'</div><div>mirax.LAYER_0_LEVEL_8_SECTION.OVERLAP_Y: '0.65625'</div><div>mirax.LAYER_0_LEVEL_9_SECTION.DIGITIZER_HEIGHT: '364'</div><div>mirax.LAYER_0_LEVEL_9_SECTION.DIGITIZER_WIDTH: '484'</div><div>mirax.LAYER_0_LEVEL_9_SECTION.IMAGE_COMPRESSION_FACTOR: '90'</div><div>mirax.LAYER_0_LEVEL_9_SECTION.IMAGE_CONCAT_FACTOR: '1'</div><div>mirax.LAYER_0_LEVEL_9_SECTION.IMAGE_FILL_COLOR_BGR: '16777215'</div><div>mirax.LAYER_0_LEVEL_9_SECTION.IMAGE_FORMAT: 'JPEG'</div><div>mirax.LAYER_0_LEVEL_9_SECTION.MICROMETER_PER_PIXEL_X: '104.815541132241'</div><div>mirax.LAYER_0_LEVEL_9_SECTION.MICROMETER_PER_PIXEL_Y: '104.215046142218'</div><div>mirax.LAYER_0_LEVEL_9_SECTION.OVERLAP_X: '0.328125'</div><div>mirax.LAYER_0_LEVEL_9_SECTION.OVERLAP_Y: '0.328125'</div><div>mirax.LAYER_0_SECTION.GAMMA_APPLIED: 'False'</div><div>mirax.LAYER_0_SECTION.GAMMA_VALUE: '1'</div><div>mirax.LAYER_0_SECTION.SHARPENED: 'False'</div><div>mirax.LAYER_0_SECTION.SQRT2_RESIZED: 'True'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.ACTIVE: 'ON'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.COLOR_B: '0'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.COLOR_G: '0'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.COLOR_R: '0'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.DATA_IN_THIS_FILTER_LEVEL: 'FilterLevel_0'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.DIGITALGAIN: '0'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.EXPOSUREPERCENTAGE: '100'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.EXPOSURE_TIME: '6099'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.EXTENDED_STEP_COUNT: '1'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.EXTENDED_STEP_SIZE: '0'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.FILTER_NAME: 'Optovar 1.6x'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.FILTER_REAL_POSITION: '9'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.IS_MASTER_FILTER: 'True'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.IS_STITCHING_FILTER: '1'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.MODIFY: 'ON'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.STORING_CHANNEL_NUMBER: '0'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.THRESHOLD: '0'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.USE_BLUE_CHANNEL: 'False'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.USE_GREEN_CHANNEL: 'False'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.USE_RED_CHANNEL: 'False'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.XDIFF: '0'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.YDIFF: '0'</div><div>mirax.LAYER_1_LEVEL_0_SECTION.ZDIFF: '0'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.ACTIVE: 'ON'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.COLOR_B: '0'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.COLOR_G: '0'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.COLOR_R: '0'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.DATA_IN_THIS_FILTER_LEVEL: 'FilterLevel_0'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.DIGITALGAIN: '0'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.EXPOSUREPERCENTAGE: '100'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.EXTENDED_STEP_COUNT: '1'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.EXTENDED_STEP_SIZE: '0'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.FILTER_NAME: 'Optovar 1.6x'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.FILTER_REAL_POSITION: '9'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.IS_MASTER_FILTER: 'True'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.IS_STITCHING_FILTER: '1'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.MODIFY: 'ON'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.STORING_CHANNEL_NUMBER: '1'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.THRESHOLD: '0'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.USE_BLUE_CHANNEL: 'False'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.USE_GREEN_CHANNEL: 'False'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.USE_RED_CHANNEL: 'False'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.XDIFF: '0'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.YDIFF: '0'</div><div>mirax.LAYER_1_LEVEL_1_SECTION.ZDIFF: '0'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.ACTIVE: 'ON'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.COLOR_B: '0'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.COLOR_G: '0'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.COLOR_R: '0'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.DATA_IN_THIS_FILTER_LEVEL: 'FilterLevel_0'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.DIGITALGAIN: '0'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.EXPOSUREPERCENTAGE: '100'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.EXTENDED_STEP_COUNT: '1'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.EXTENDED_STEP_SIZE: '0'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.FILTER_NAME: 'Optovar 1.6x'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.FILTER_REAL_POSITION: '9'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.IS_MASTER_FILTER: 'True'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.IS_STITCHING_FILTER: '1'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.MODIFY: 'ON'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.STORING_CHANNEL_NUMBER: '2'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.THRESHOLD: '0'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.USE_BLUE_CHANNEL: 'False'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.USE_GREEN_CHANNEL: 'False'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.USE_RED_CHANNEL: 'False'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.XDIFF: '0'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.YDIFF: '0'</div><div>mirax.LAYER_1_LEVEL_2_SECTION.ZDIFF: '0'</div><div>mirax.NONHIERLAYER_0_LEVEL_0_SECTION.SCANMAP_IMAGE_HEIGHT: '438'</div><div>mirax.NONHIERLAYER_0_LEVEL_0_SECTION.SCANMAP_IMAGE_TYPE: 'PNG'</div><div>mirax.NONHIERLAYER_0_LEVEL_0_SECTION.SCANMAP_IMAGE_WIDTH: '146'</div><div>mirax.NONHIERLAYER_0_LEVEL_2_SECTION.THUMBNAIL_IMAGE_HEIGHT: '1105'</div><div>mirax.NONHIERLAYER_0_LEVEL_2_SECTION.THUMBNAIL_IMAGE_TYPE: 'JPEG'</div><div>mirax.NONHIERLAYER_0_LEVEL_2_SECTION.THUMBNAIL_IMAGE_WIDTH: '533'</div><div>mirax.NONHIERLAYER_0_LEVEL_3_SECTION.BARCODE_IMAGE_HEIGHT: '435'</div><div>mirax.NONHIERLAYER_0_LEVEL_3_SECTION.BARCODE_IMAGE_TYPE: 'JPEG'</div><div>mirax.NONHIERLAYER_0_LEVEL_3_SECTION.BARCODE_IMAGE_WIDTH: '576'</div><div>mirax.NONHIERLAYER_0_LEVEL_4_SECTION.PREVIEW_IMAGE_HEIGHT: '1918'</div><div>mirax.NONHIERLAYER_0_LEVEL_4_SECTION.PREVIEW_IMAGE_TYPE: 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'134'</div><div>mirax.NONHIERLAYER_0_SECTION.SCANNED_FOV_COUNT: '1360'</div><div>mirax.NONHIERLAYER_0_SECTION.SCANNER_CAMERA_TYPE: 'Default camera'</div><div>mirax.NONHIERLAYER_0_SECTION.SCANNER_HARDWARE_VERSION: 'v0.5'</div><div>mirax.NONHIERLAYER_0_SECTION.SCANNER_SOFTWARE_VERSION: '1,12,25,3'</div><div>mirax.NONHIERLAYER_0_SECTION.SCANNING_TIME_IN_SEC: '528'</div><div>mirax.NONHIERLAYER_1_SECTION.VIMSLIDE_HISTOGRAM_DATA_CHANNEL_NUM: '3'</div><div>mirax.NONHIERLAYER_1_SECTION.VIMSLIDE_HISTOGRAM_DATA_CHANNEL_SIZE: '256'</div><div>mirax.NONHIERLAYER_1_SECTION.VIMSLIDE_HISTOGRAM_DATA_FORMAT_VERSION: '257'</div><div>mirax.NONHIERLAYER_2_SECTION.DATA_FORMAT_VERSION: '258'</div><div>mirax.NONHIERLAYER_3_SECTION.VIMSLIDE_POSITION_DATA_FORMAT_VERSION: '257'</div><div>mirax.NONHIERLAYER_4_LEVEL_0_SECTION.WALKEDMASK_IMAGE_FORMAT: 'GRAYPNG'</div><div>openslide.background-color: 'FFFFFF'</div><div>openslide.bounds-height: '26648'</div><div>openslide.bounds-width: '27599'</div><div>openslide.bounds-x: '54036'</div><div>openslide.bounds-y: '96401'</div><div>openslide.level-count: '10'</div><div>openslide.level[0].downsample: '1'</div><div>openslide.level[0].height: '245448'</div><div>openslide.level[0].width: '116968'</div><div>openslide.level[1].downsample: '2'</div><div>openslide.level[1].height: '122724'</div><div>openslide.level[1].width: '58484'</div><div>openslide.level[2].downsample: '4'</div><div>openslide.level[2].height: '61362'</div><div>openslide.level[2].width: '29242'</div><div>openslide.level[3].downsample: '8'</div><div>openslide.level[3].height: '30681'</div><div>openslide.level[3].width: '14621'</div><div>openslide.level[4].downsample: '16'</div><div>openslide.level[4].height: '15340'</div><div>openslide.level[4].width: '7310'</div><div>openslide.level[5].downsample: '32'</div><div>openslide.level[5].height: '7670'</div><div>openslide.level[5].width: '3655'</div><div>openslide.level[6].downsample: '64'</div><div>openslide.level[6].height: '3835'</div><div>openslide.level[6].width: '1827'</div><div>openslide.level[7].downsample: '128'</div><div>openslide.level[7].height: '1917'</div><div>openslide.level[7].width: '913'</div><div>openslide.level[8].downsample: '256'</div><div>openslide.level[8].height: '958'</div><div>openslide.level[8].width: '456'</div><div>openslide.level[9].downsample: '512'</div><div>openslide.level[9].height: '479'</div><div>openslide.level[9].width: '228'</div><div>openslide.mpp-x: '0.20535898454321799'</div><div>openslide.mpp-y: '0.204395601349872'</div><div>openslide.objective-power: '20'</div><div>openslide.quickhash-1: '2c6cbc5cb75bd8c5fc7872fe45c9993016f3b9d29284aa266027e04656160f45'</div><div>openslide.vendor: 'mirax'</div></div><div><br></div><div><br></div></div><div class="gmail_extra"><br clear="all"><div><div dir="ltr"><br><div><div style="font-family:arial;font-size:small"><font color="#444444">Sincerely,</font></div><div style="font-family:arial;font-size:small"><font color="#444444"><br></font></div><div style="font-size:small"><font face="tahoma, sans-serif">Jonas Ogaard</font></div><div style="font-size:small"><font face="tahoma, sans-serif" color="#444444">Research Institute for Internal Medicine<br>Oslo University Hospital Rikshospitalet</font></div></div></div></div>
<br><div class="gmail_quote">On 13 September 2014 14:58, <span dir="ltr"><<a href="mailto:jcupitt@gmail.com" target="_blank">jcupitt@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi Jonas,<br>
<span class=""><br>
On 13 September 2014 13:02, Jonas Øgaard <<a href="mailto:jonas.ogaard@rr-research.no">jonas.ogaard@rr-research.no</a>> wrote:<br>
> I'm attempting to convert Mirax slides to ptif format for wider<br>
> compatibility for in-department usage, however the files produced using<br>
> syntax described<br>
> <a href="https://github.com/openslide/openslide/wiki/OpenSlideAndVIPS" target="_blank">https://github.com/openslide/openslide/wiki/OpenSlideAndVIPS</a> does not yield<br>
> valid files for Openslide to read.<br>
<br>
</span>The commands there convert files in formats that openslide can read,<br>
like mirax, to files that most systems should be able to read, like<br>
tif. What command did you run, what did you then try to load the files<br>
into, and what error message did you get?<br>
<br>
John<br>
</blockquote></div><br></div>